Héctor Corrada Bravo : rechercher sur Z-Library

Paulson, Joseph N, Stine, O Colin, Bravo, Héctor Corrada, Pop, Mihai

Année:

2015

Langue:

english

Fichier:

PDF, 364 KB

english, 2015

Differential abundance analysis for microbial marker-gene surveys

Journal:

Héctor Corrada Bravo, Rafael A. Irizarry

Année:

2013

Langue:

english

Fichier:

PDF, 560 KB

english, 2013

Model-Based Quality Assessment and Base-Calling for Second-Generation Sequencing Data

Journal:

Biometrics

Année:

2010

Langue:

english

Fichier:

PDF, 588 KB

english, 2010

Intensity normalization improves color calling in SOLiD sequencing

Wu, Hao, Irizarry, Rafael A, Bravo, Héctor Corrada

Journal:

Leek, Jeffrey T., Scharpf, Robert B., Bravo, Héctor Corrada, Simcha, David, Langmead, Benjamin, Johnson, W. Evan, Geman, Donald, Baggerly, Keith, Irizarry, Rafael A.

Année:

2010

Langue:

english

Fichier:

PDF, 138 KB

english, 2010

Tackling the widespread and critical impact of batch effects in high-throughput data

Journal:

Nature Reviews Genetics

Année:

2010

Langue:

english

Fichier:

PDF, 450 KB

english, 2010

Increased methylation variation in epigenetic domains across cancer types

Hansen, Kasper Daniel, Timp, Winston, Bravo, Héctor Corrada, Sabunciyan, Sarven, Langmead, Benjamin, McDonald, Oliver G, Wen, Bo, Wu, Hao, Liu, Yun, Diep, Dinh

Journal:

Nature Genetics

Année:

2011

Langue:

english

Fichier:

PDF, 3.21 MB

english, 2011

Automated classification of bird and amphibian calls using machine learning: A comparison of methods

Miguel A. Acevedo, Carlos J. Corrada-Bravo, Héctor Corrada-Bravo, Luis J. Villanueva-Rivera, T. Mitchell Aide

Journal:

Ecological Informatics

Année:

2009

Langue:

english

Fichier:

PDF, 1.08 MB

english, 2009

Effective detection of rare variants in pooled DNA samples using Cross-pool tailcurve analysis

Tejasvi S Niranjan, Abby Adamczyk, Héctor Corrada Bravo, Margaret A Taub, Sarah J Wheelan, Rafael Irizarry, Tao Wang

Journal:

Evan, Amato T., Heidinger, Andrew K., Bennartz, Ralf, Bennington, Val, Mahowald, Natalie M., Corrada-Bravo, Hector, Velden, Christopher S., Myhre, Gunnar, Kossin, James P.

Année:

2011

Langue:

english

Fichier:

PDF, 7.29 MB

english, 2011

Ocean temperature forcing by aerosols across the Atlantic tropical cyclone development region

Journal:

Geochemistry, Geophysics, Geosystems

Année:

2008

Langue:

english

Fichier:

PDF, 207 KB

english, 2008

Gene expression anti-profiles as a basis for accurate universal cancer signatures

Héctor Corrada Bravo, Vasyl Pihur, Matthew McCall, Rafael A Irizarry, Jeffrey T Leek

Journal:

Weiliang Shi, Grace Wahba, Rafael A Irizarry, Hector Corrada Bravo, Stephen J Wright

Année:

2012

Langue:

english

Fichier:

PDF, 1.58 MB

english, 2012

The partitioned LASSO-patternsearch algorithm with application to gene expression data

Journal:

Tejasvi S Niranjan, Abby Adamczyk, Hector Corrada Bravo, Margaret A Taub…

Année:

2012

Langue:

english

Fichier:

PDF, 340 KB

english, 2012

Effective detection of rare variants in pooled DNA samples using cross-pool tail-curve analysis

Journal:

Joseph N Paulson, Mihai Pop, Hector Corrada Bravo

Année:

2011

Langue:

english

Fichier:

PDF, 373 KB

english, 2011

Metastats: an improved statistical method for analysis of metagenomic data

Journal:

Tejasvi S Niranjan, Abby Adamczyk, Hector Corrada Bravo, Margaret A Taub…

Année:

2011

Langue:

english

Fichier:

PDF, 333 KB

english, 2011

Effective detection of rare variants in pooled DNA samples using cross-pool tail-curve analysis

Journal:

Joseph N Paulson, Mihai Pop, Hector Corrada Bravo

Année:

2011

Langue:

english

Fichier:

PDF, 333 KB

english, 2011

Metastats: an improved statistical method for analysis of metagenomic data

Journal:

Paulson, Joseph N, Bravo, Héctor Corrada, Pop, Mihai

Année:

2011

Langue:

english

Fichier:

PDF, 373 KB

english, 2011

Reply to: "A fair comparison"

Journal:

Chelaru, Florin, Smith, Llewellyn, Goldstein, Naomi, Bravo, Héctor Corrada

Année:

2014

Langue:

english

Fichier:

PDF, 364 KB

english, 2014

Epiviz: interactive visual analytics for functional genomics data

Journal:

Winston Timp,Hector Corrada Bravo,Oliver G McDonald,Michael Goggins…

Année:

2014

Langue:

english

Fichier:

PDF, 499 KB

english, 2014

Large hypomethylated blocks as a universal defining epigenetic alteration in human solid tumors

Journal:

Genome Medicine

Année:

2014

Langue:

english

Fichier:

PDF, 2.16 MB

english, 2014

Overcoming bias and systematic errors in next generation sequencing data

Margaret A Taub,Hector Corrada Bravo,Rafael A Irizarry

Journal:

Genome Medicine

Année:

2010

Langue:

english

Fichier:

PDF, 702 KB

english, 2010

A Decision-Theory Approach to Interpretable Set Analysis for High-Dimensional Data

Boca, Simina M., Bravo, Héctor Corrada, Caffo, Brian, Leek, Jeffrey T., Parmigiani, Giovanni

Journal:

Biometrics

Année:

2013

Langue:

english

Fichier:

PDF, 355 KB

english, 2013

Transcriptomic profiling of gene expression and RNA processing during Leishmania major differentiation

Dillon, Laura A. L., Okrah, Kwame, Hughitt, V. Keith, Suresh, Rahul, Li, Yuan, Fernandes, Maria Cecilia, Belew, A. Trey, Corrada Bravo, Hector, Mosser, David M., El-Sayed, Najib M.

Journal:

Nucleic Acids Research

Année:

2015

Langue:

english

Fichier:

PDF, 1.75 MB

english, 2015

[ACM Press the 2007 ACM SIGMOD international conference - Beijing, China (2007.06.11-2007.06.14)] Proceedings of the 2007 ACM SIGMOD international conference on Management of data - SIGMOD '07 - Optimizing mpf queries

Bravo, Héctor Corrada, Ramakrishnan, Raghu

Année:

2007

Langue:

english

Fichier:

PDF, 1.14 MB

english, 2007

Privacy-Preserving Microbiome Analysis Using Secure Computation

Wagner, Justin, Paulson, Joseph N., Wang, Xiao, Bhattacharjee, Bobby, Bravo, Héctor Corrada

Journal:

Dorri, Faezeh, Mendelowitz, Lee, Corrada Bravo, Héctor

Année:

2016

Langue:

english

Fichier:

PDF, 199 KB

english, 2016

methylFlow: cell-specific methylation pattern reconstruction from high-throughput bisulfite-converted DNA sequencing

Journal:

Sharmin, Mahfuza, Bravo, Héctor Corrada, Hannenhalli, Sridhar

Année:

2016

Langue:

english

Fichier:

PDF, 552 KB

english, 2016

Distinct genomic and epigenomic features demarcate hypomethylated blocks in colon cancer

Journal:

BMC Cancer

Année:

2016

Langue:

english

Fichier:

PDF, 1.08 MB

english, 2016

Dual Transcriptome Profiling of Leishmania -Infected Human Macrophages Reveals Distinct Reprogramming Signatures

Fernandes, Maria Cecilia, Dillon, Laura A. L., Belew, Ashton Trey, Bravo, Hector Corrada, Mosser, David M., El-Sayed, Najib M.

Journal:

mBio

Année:

2016

Langue:

english

Fichier:

PDF, 2.35 MB

english, 2016

Simultaneous transcriptional profiling ofLeishmania majorand its murine macrophage host cell reveals insights into host-pathogen interactions

Dillon, Laura A. L., Suresh, Rahul, Okrah, Kwame, Corrada Bravo, Hector, Mosser, David M., El-Sayed, Najib M.

Journal:

BMC Genomics

Année:

2015

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2015

Heterogeneity of transcription factor binding specificity models within and across cell lines

Sharmin, Mahfuza, Bravo, Héctor Corrada, Hannenhalli, Sridhar

Journal:

Genome Research

Année:

2016

Langue:

english

Fichier:

PDF, 1.42 MB

english, 2016

A Model for Early Prediction of Facial Nerve Recovery After Vestibular Schwannoma Surgery

Rivas, Alejandro, Boahene, Kofi D., Bravo, Héctor Corrada, Tan, Marietta, Tamargo, Rafael J., Francis, Howard W.

Journal:

Otology & Neurotology

Année:

2011

Langue:

english

Fichier:

PDF, 253 KB

english, 2011

BatchQC: interactive software for evaluating sample and batch effects in genomic data

Manimaran, Solaiappan, Selby, Heather Marie, Okrah, Kwame, Ruberman, Claire, Leek, Jeffrey T., Quackenbush, John, Haibe-Kains, Benjamin, Bravo, Hector Corrada, Johnson, W. Evan

Journal:

Heath, Lenwood S., Corrada Bravo, Hector, Caccamo, Mario, Schatz, Michael

Année:

2016

Langue:

english

Fichier:

PDF, 137 KB

english, 2016

Bioinformatics of DNA

Journal:

Proceedings of the IEEE

Année:

2017

Langue:

english

Fichier:

PDF, 246 KB

english, 2017

DNA Methylation Patterns in Cord Blood of Neonates Across Gestational Age

Braid, Susan M., Okrah, Kwame, Shetty, Amol, Corrada Bravo, Hector

Journal:

Nursing Research

Année:

2017

Langue:

english

Fichier:

PDF, 539 KB

english, 2017

Epiviz: a view inside the design of an integrated visual analysis software for genomics

Florin Chelaru,Héctor Corrada Bravo

Journal:

Dinalankara, Wikum, Bravo, Héctor Corrada

Année:

2015

Langue:

english

Fichier:

PDF, 1.42 MB

english, 2015

Gene Expression Signatures Based on Variability can Robustly Predict Tumor Progression and Prognosis

Journal:

Cancer Informatics

Année:

2015

Langue:

english

Fichier:

PDF, 1.74 MB

english, 2015

Metaviz: interactive statistical and visual analysis of metagenomic data

Wagner, Justin, Chelaru, Florin, Kancherla, Jayaram, Paulson, Joseph N, Zhang, Alexander, Felix, Victor, Mahurkar, Anup, Elmqvist, Niklas, Corrada Bravo, Héctor

Journal:

Nucleic Acids Research

Année:

2018

Langue:

english

Fichier:

PDF, 2.84 MB

english, 2018

Smooth quantile normalization

Hicks, Stephanie C, Okrah, Kwame, Paulson, Joseph N, Quackenbush, John, Irizarry, Rafael A, Bravo, Héctor Corrada

Journal:

Biostatistics

Année:

2018

Langue:

english

Fichier:

PDF, 9.50 MB

english, 2018

The Splicing Factor RNA-Binding Fox Protein 1 Mediates the Cellular Immune Response in Drosophila melanogaster

Nazario-Toole, Ashley E., Robalino, Javier, Okrah, Kwame, Corrada-Bravo, Hector, Mount, Stephen M., Wu, Louisa P.

Journal:

The Journal of Immunology

Année:

2018

Langue:

english

Fichier:

PDF, 1.76 MB

english, 2018

Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment

Pop, Mihai, Paulson, Joseph N., Chakraborty, Subhra, Astrovskaya, Irina, Lindsay, Brianna R., Li, Shan, Bravo, Héctor Corrada, Harro, Clayton, Parkhill, Julian, Walker, Alan W., Walker, Richard I., Sa

Journal:

BMC Genomics

Année:

2016

Langue:

english

Fichier:

PDF, 3.62 MB

english, 2016

Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: report from the Winter Mid-Atlantic Microbiome Meet-up, College Park, MD, January 10, 2018

Meisel, Jacquelyn S., Nasko, Daniel J., Brubach, Brian, Cepeda-Espinoza, Victoria, Chopyk, Jessica, Corrada-Bravo, Héctor, Fedarko, Marcus, Ghurye, Jay, Javkar, Kiran, Olson, Nathan D., Shah, Nidhi, A

Journal:

Microbiome

Année:

2018

Langue:

english

Fichier:

PDF, 718 KB

english, 2018

Analysis and correction of compositional bias in sparse sequencing count data

Kumar, M. Senthil, Slud, Eric V., Okrah, Kwame, Hicks, Stephanie C., Hannenhalli, Sridhar, Corrada Bravo, Héctor

Journal:

BMC Genomics

Année:

2018

Langue:

english

Fichier:

PDF, 1.86 MB

english, 2018

metagenomeFeatures : An R package for working with 16S rRNA reference databases and marker-gene survey feature data

Olson, Nathan D, Shah, Nidhi, Kancherla, Jayaram, Wagner, Justin, Paulson, Joseph N, Corrada-Bravo, Hector, Kelso, Janet

Journal:

Gunady, Mohamed K, Mount, Stephen M, Corrada Bravo, Héctor

Année:

2019

Langue:

english

Fichier:

PDF, 348 KB

english, 2019

Yanagi: Fast and interpretable segment-based alternative splicing and gene expression analysis

Journal:

Cui, Zhe, Kancherla, Jayaram, Chang, Kyle W, Elmqvist, Niklas, Bravo, Héctor Corrada, Hancock, John

Année:

2019

Fichier:

PDF, 3.14 MB

2019

Proactive Visual and Statistical Analysis of Genomic Data in Epiviz

Journal:

Cui, Zhe, Kancherla, Jayaram, Chang, Kyle W, Elmqvist, Niklas, Bravo, Héctor Corrada, Hancock, John

Année:

2019

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2019

Proactive Visual and Statistical Analysis of Genomic Data in Epiviz

Journal:

Cui, Zhe, Kancherla, Jayaram, Bravo, Hector Corrada, Elmqvist, Niklas

Année:

2019

Fichier:

PDF, 1.19 MB

2019

A framework for assessing 16S rRNA marker-gene survey data analysis methods using mixtures.

Olson, Nathan D., Kumar, M. Senthil, Li, Shan, Braccia, Domenick J., Hao, Stephanie, Timp, Winston, Salit, Marc L., Stine, O. Colin, Bravo, Hector Corrada

Journal:

Microbiome

Année:

2020

Langue:

english

Fichier:

PDF, 1.75 MB

english, 2020

[IEEE 2019 IEEE Visualization in Data Science (VDS) - Vancouver, BC, Canada (2019.10.20-2019.10.20)] 2019 IEEE Visualization in Data Science (VDS) - Sherpa: Leveraging User Attention for Computational Steering in Visual Analytics

Année:

2019

Langue:

english

Fichier:

PDF, 2.30 MB

english, 2019

Epiviz File Server: Query, Transform and Interactively Explore Data from Indexed Genomic Files

Kancherla, Jayaram, Yang, Yifan, Chae, Hyeyun, Bravo, Hector Corrada, Valencia, Alfonso

Journal: